seeQTL: A searchable human eQTL browser and database

 

 

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Landmark or Region: Examples: chr5:94295780..99295779, chr1:55830000..58019999, chr1:64690000..65979999, chr1:229780000..229979999, chr1:229815000..229954000, rs187462, ERAP2.	Annotate Restriction Sites Download Decorated FASTA File Download Sequence File Download Track Data Download generic
Data Source liver seeQTL	Scroll/Zoom:     Show 5 Mbp Show 2 Mbp Show 1 Mbp Show 200 kbp Show 100 kbp Show 50 kbp Show 20 kbp Show 10 kbp Show 5 kbp Show 2 kbp Show 1 kbp Show 200 bp Show 100 bp Show 1 bp     Flip

The following 3 regions match your request.

 

chr5

 

 

chr15

Name	Type	Description	Position	Match Score
ARID3B	meta_cis_eQTL	rs187462339	chr15:74996133..74996133	5.963
C15orf17	meta_cis_eQTL	rs187462339	chr15:74996133..74996133	3.403
RICTOR	UNC_sQTLseekeR	rs187462062	chr5:39044296..39044296	2.5

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Ensembl mRNA	Exon ID	Small RNAs and linc RNA
Ensembl Gene Region	meta cis-eQTL meta-analysis	UNC cis-eQTL meta-analysis
Ensembl Genes	Protein-coding genes	UNC sQTLseekeR

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meta cis-eQTL meta-analysis Manhattan plot (-log10 q-value)

UNC cis-eQTL meta-analysis Manhattan plot (-log10 q-value)

UNC sQTLseekerR meta-analysis Manhattan plot (-log10 q-value)

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hg38 Ideogram

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