seeQTL: A searchable human eQTL browser and database

 

 

Browser Select Tracks Snapshots Community Tracks Custom Tracks Preferences

 Search

 Search

Landmark or Region: Examples: chr5:94295780..99295779, chr1:55830000..58019999, chr1:64690000..65979999, chr1:229780000..229979999, chr1:229815000..229954000, rs187462, ERAP2.	Annotate Restriction Sites Download Decorated FASTA File Download Sequence File Download Track Data Download generic
Data Source liver seeQTL	Scroll/Zoom:     Show 5 Mbp Show 2 Mbp Show 1 Mbp Show 200 kbp Show 100 kbp Show 50 kbp Show 20 kbp Show 10 kbp Show 5 kbp Show 2 kbp Show 1 kbp Show 200 bp Show 100 bp Show 1 bp     Flip

 Overview

 Overview

 

 Region

 Region

 

 Details

 Details

 

  UNC cis-eQTL meta-analysis Manhattan plot (-log...  

  Ensembl Gene Region  

  Ensembl Genes  

  UNC cis-eQTL meta-analysis  

  Exon ID  

  UNC sQTLseekeR  

  UNC sQTLseekerR meta-analysis Manhattan plot (-...  

  meta cis-eQTL meta-analysis  

  meta cis-eQTL meta-analysis Manhattan plot (-lo...  

Clear highlighting

<< Back to Browser Show Active Tracks Only Show Favorites Only Clear All Favorites

 Tracks

 Tracks

 

 General

 General

 All on All off 

Ensembl mRNA	Exon ID	Small RNAs and linc RNA
Ensembl Gene Region	meta cis-eQTL meta-analysis	UNC cis-eQTL meta-analysis
Ensembl Genes	Protein-coding genes	UNC sQTLseekeR

 Gene

 Gene

 All on All off 

meta cis-eQTL meta-analysis Manhattan plot (-log10 q-value)

UNC cis-eQTL meta-analysis Manhattan plot (-log10 q-value)

UNC sQTLseekerR meta-analysis Manhattan plot (-log10 q-value)

 Overview

 Overview

 All on All off 

hg38 Ideogram

 Analysis

 Analysis

 All on All off 

Restriction Sites

Snapshots

Snapshot Name

Snapshot Timestamp [GMT]

Community Tracks

Filter: Showing 0 files.

There are no available unused public available tracks. Select "Custom Tracks" to see ones you've already added to your session.

Custom Tracks

[Help with uploading custom tracks]

There are no tracks yet.

Add custom tracks : [From text] [From a URL] [From a file]

Show grid	Image Width 450 640 800 1024	Highlight feature(s) (feature1 feature2...) Clear highlighting
Cache tracks		Highlight regions (region1:start..end region2:start..end) Clear highlighting
Show tooltips		Region Size (bp) 2000000 20000 10000 5000 1000

© NCSU 2021. seeQTL to nevegate QTL data from different sources. For questions about the data at this site, please contact us through the contact form. For support about a technical issue, send an email to ddjima2014@gmail.com or Go back to home page to nevigate more seeQTL front page.